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Z
A
annotate_between_curve() (Scorelator static method)
area_between_curves() (in module mrtool.evidence_score.scorelator)
attach_data() (CovModel method)
(MRBRT method)
avg_integral() (in module mrtool.core.utils)
C
check_input() (MRBRT method)
col_diff_mat() (in module mrtool.core.utils)
combine_cols() (in module mrtool.core.utils)
CovFinder (class in mrtool.cov_selection.covfinder)
CovModel (class in mrtool.core.cov_model)
create_c_mat() (MRBRT method)
create_constraint_mat() (CovModel method)
(LogCovModel method)
create_design_mat() (CovModel method)
create_draws() (MRBeRT method)
(MRBRT method)
create_gprior() (MRBRT method)
create_h_mat() (MRBRT method)
create_knots_samples() (in module mrtool.core.model)
create_lprior() (MRBRT method)
create_model() (CovFinder method)
create_regularization_mat() (CovModel method)
create_spline() (CovModel method)
create_uprior() (MRBRT method)
create_x_fun() (CovModel method)
(LinearCovModel method)
(LogCovModel method)
(MRBRT method)
create_z_mat() (CovModel method)
(LinearCovModel method)
(LogCovModel method)
(MRBRT method)
E
empty_array() (in module mrtool.core.utils)
expand_array() (in module mrtool.core.utils)
extract_re() (MRBRT method)
F
fit_gaussian_model() (CovFinder method)
fit_laplace_model() (CovFinder method)
fit_model() (MRBeRT method)
(MRBRT method)
fit_pre_selected_covs() (CovFinder method)
G
get_cols() (in module mrtool.core.utils)
get_cov_model() (MRBRT method)
get_cov_model_index() (MRBRT method)
get_covs() (MRData method)
get_evidence_score() (Scorelator method)
get_generators() (Polyhedron method)
get_study_data() (MRData method)
H
has_covs() (MRData method)
has_data() (CovModel method)
has_studies() (MRData method)
I
INEQUALITY (RepType attribute)
input_cols() (in module mrtool.core.utils)
input_gaussian_prior() (in module mrtool.core.utils)
input_laplace_prior() (in module mrtool.core.utils)
input_uniform_prior() (in module mrtool.core.utils)
is_cols() (in module mrtool.core.utils)
is_cov_normalized() (MRData method)
is_empty() (MRData method)
is_gaussian_prior() (in module mrtool.core.utils)
is_laplace_prior() (in module mrtool.core.utils)
is_numeric_array() (in module mrtool.core.utils)
is_significance() (CovFinder static method)
is_uniform_prior() (in module mrtool.core.utils)
L
LimeTr (class in mrtool.core.model)
LinearCovModel (class in mrtool.core.cov_model)
load_df() (MRData method)
load_xr() (MRData method)
LogCovModel (class in mrtool.core.cov_model)
loose_gamma_uprior (CovFinder attribute)
M
mat_to_fun() (in module mrtool.core.utils)
mat_to_log_fun() (in module mrtool.core.utils)
Matrix (class in mrtool.core.utils)
MRBeRT (class in mrtool.core.model)
MRBRT (class in mrtool.core.model)
MRData (class in mrtool.core.data)
mrtool.core.cov_model (module)
mrtool.core.data (module)
mrtool.core.model (module)
mrtool.core.utils (module)
mrtool.cov_selection.covfinder (module)
mrtool.evidence_score.scorelator (module)
N
nonlinear_trans() (in module mrtool.core.utils)
normalize_covs() (MRData method)
normalize_ln_rr_draws() (Scorelator method)
num_constraints (CovModel attribute)
(LogCovModel attribute)
num_covs (MRData attribute)
num_obs (MRData attribute)
num_points (MRData attribute)
num_regularizations (CovModel attribute)
num_studies (MRData attribute)
num_x_vars (CovModel attribute)
num_z_vars (CovModel attribute)
(LogCovModel attribute)
P
Polyhedron (class in mrtool.core.utils)
predict() (MRBeRT method)
(MRBRT method)
R
ravel_dict() (in module mrtool.core.utils)
RepType (class in mrtool.core.utils)
reset() (MRData method)
S
sample_knots() (in module mrtool.core.utils)
sample_simplex() (in module mrtool.core.utils)
sample_soln() (MRBeRT method)
(MRBRT method)
score_model() (MRBeRT method)
score_sub_models_datafit() (in module mrtool.core.model)
score_sub_models_variation() (in module mrtool.core.model)
Scorelator (class in mrtool.evidence_score.scorelator)
select_covs() (CovFinder method)
select_covs_by_laplace() (CovFinder method)
seq_area_between_curves() (in module mrtool.evidence_score.scorelator)
sizes_to_indices() (in module mrtool.core.utils)
summary() (MRBeRT method)
(MRBRT method)
summary_gaussian_model() (CovFinder method)
T
to_df() (MRData method)
to_list() (in module mrtool.core.utils)
U
update_beta_gprior() (CovFinder method)
Z
zero_gamma_uprior (CovFinder attribute)
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